actsnclass.Canonical.snpcc_get_canonical_info

Canonical.snpcc_get_canonical_info(path_to_rawdata_dir: str, canonical_output_file: str, compute=True, save=True, canonical_input_file='')

Load SNPCC metada data required to characterize objects.

Populates attribute: data.

Parameters:

• path_to_rawdata_dir (str) – Complete path to directory holding raw data files.

• canonical_output_file (str) – Complete path to output canonical sample file.

• compute (bool (optional)) – Compute required metada from raw data files. Default is True.

• save (bool (optional)) – Save metadata to file. Default is True.

• canonical_input_file (str (optional)) – Path to input file if required metadata was previously calculated. If name is give, ‘compute’ must be False.